IDENTIFICATION AND GENETIC SIMILARITY ANALYSIS OF DATE PALM (Phoenix dactylifera L.) COLLECTED FROM DIFFER- ENT REGIONS IN SIWA OASIS USING MORPHOLOGICALLY TRAITS AND MOLECULAR MARKERS.

Authors

  • REHAM M. ABD EL-AZEEM Department of Molecular Biology, Genetic Engineering & Biotechnology Research Institute, Minufiya University, Egypt
  • M. H. HASHEM Department of Animal Biotechnology, Genetic Engineering & Biotechnology Research Institute, Minufiya University, Egypt
  • A. A. HEMEIDA Department of Bioinformatics, Genetic Engineering & Biotechnology Research Institute, Minufiya University, Egypt

Abstract

Date palm (Phoenix dactylifera L., 2n = 36) is a fruit tree mainly cultivated in arid regions in the Middle East, where it has been domesticated for at least 5,000 years and is believed to have originated in Mesopotamia. Date palm (Phoenix dactylifera L) is the major factor of oasis environmental and economic stability (Zehdi et al., 2004). The major date producers in the world are located in the Middle East and North Africa (Rania et al., 2008).
In Egypt, date palm is an important crop where the total number of fruitful female palm is about 10 million palm trees according to the statistics of the Central Administrations of Horticultural, Ministry of Agriculture (Rania et al., 2008). This crop is of a great socioeconomic importance in oases. The oasis of Siwa located in Egypt’s western desert is about 600 km away from Alexandria and 300 km South-West from Matrouh (Mediterranean coast) and about 65 km east from the Libyan borders. Siwa oasis is a natural isolated depression in the western desert of Egypt. However, little is known about the genetic characterization of Date palm cultivars. The date palm cultivation takes about 40% of all cultivated area.
The pollen of the date palm has been found to exert a direct influence on the size, shape and color of the seed and also, on the size of the fruit, on the speed of development of the fruit and on the time of ripening of the fruit. This direct influence of the male parent on the development of the date fruit is precise and definite and varies with the particular male used to fertilize the female flowers. Each male is exerting approximately the same effect on fruit of all varieties and exerting the same effect in different years. Therefore, it is important to select and identify superior male in term of fertilization (Walter, 1928).
Recently, study of genetic diversity for plant crops is the process by which variation among individuals or groups of individuals is analyzed by a specific genetically method or a combination of such methods. The most important measurements are data obtained by DNA based marker data that detect and monitor identification of different genomes. Many new markers can be identified in the same region using inter Simple Sequence Repeat (ISSR) markers linked to genes of interest. Furthermore, ISSR is informative about many loci and are suitable to discriminate closely related genotype variants and lastly, ISSR markers constitute discrete markers suitable in the DNA fingerprinting (Gupta and Varshney, 2000).
The objectives of this study were designed to the determine morphological traits among nine date palm cultivars and six male trees grow in Siwa oasis and develop molecular fingerprints based RAPD and ISSR analysis. Moreover, through the obtained data, determine genetic relationships among these cultivars by applying morphological and molecular analysis.

References

Abou Gabal, A. A., A. A. Abdelaziz, M. M. Harhash and H.F. El-Wakil (2006). Genetic diversity among seven Date palm landraces in Siwa oasis. Egypt. J. Genet. Cytol. 35: 117-128.

Adawy, S. S., E. H. A. Hussien, E. M. Samer and H. A. El-Itriby (2005). Genomic diversity in date palm cultivars (Phoenix dactylifera L.) as reveled by AFLPs in comparison to RAPDs and ISSRs. Arab J. Biotech., 8: 99-114.

Adawy, S. S., Ebtissam A. Hussein, Dina El-Khishin, H. Moharam and Hanayia A. El-Itriby (2002). Genetic variability studies and molecular fingerprinting of some Egyptian date palm (Phoenix dactylifera L.) cultivars: II. RAPD and ISSR profiling. Arab J. Biotech., 5: 225-236.

Adawy, S. S., Ebtissam A. Hussein, M. M. Saker and Hanaiya A. El-Itriby (2004). Intra- and Inter-varietal variation of Upper Egypt date palm cultivars (Phoenix dactylifera L.): I. As revealed by RAPD and ISSR markers. Proceed. Int. Conf. Genet. Eng. & Appl., Sharm El-Sheikh, South Sinai, Egypt (April, 8-11, 2004): 165-179.

Amel, HCh,. M. Khaled, M. M. Messaoud and T. Mokhtar (2005). Comparative analysis of genetic diversity in two Tunisian collections of Fig cultivars based on Random Amplified Polymorphic DNA and Inter Simple Sequence Repeats Fingerprints. Genetic Resources and Crop Evolution, 52: 563-573.

Ebtissam, A. Hussein, S. S. Adawy, S. E. M Ismail and Hanaiya A. El-Itriby (2005). Molecular characterization of some Egyptian date palm germplasm using RAPD and ISSR markers. Arab J. Biotech., 8: 83-98.

El-Khishin, Dina A., S. S. Adawy, Ebtissam A. Hussein and Hanaiya A. El-Itriby (2003). AFLP fingerprinting of five Egyptian date palm (Phoenix dactylifera L.) cultivars. Arab J. Biotech., 6: 223-234.

Elshibli, S. and H. Korpelainen (2009). Identity of date palm ((Phoenix dactylifera L.) germplasm in Sudan: from morphology and chemical characters to molecular markers. Acta Hort. (ISHS), 859: 143-153.

Gupta, P. K. and R. K. Varshney. (2000). The development and use of mi- crosatellite markers for genetic analyis and plant breeding with emphasis on bread wheat. Euphytica 113: 163-185.

Hamza, H., M. Rejeli, M. Elbekkay and A. Ferchichi (2009). New approach for the morphological identification of date palm (Phoenix dactylfera L.) cultivars from Tunisia. Pak. J. Bot., 41: 2671-2681.

Hassan, S., L. Philippe, T. Pierre, C. Marie-Christine and H. Serge (1998). Identification and genetic diversity analysis of date palm (Phoenix dactylifera L.) varieties from Morocco using RAPD markers. Euphytica, 103: 75-82.

Hemeida, A. A., Sanaa A. R. and M. A. Taha (2007). Molecular characterization of different Date palm (Phoenix dactylifera L.) cultivars grown in Siwa oasis. Egypt. J. Genet. Cytol., 36: 145-162.

Younis, Rania, A., Ismail Omayma M. and S. S. Soliman (2008). Identification of sex-specific DNA markers for date palm (Phoenix dactylifera L.) using RAPD and ISSR techniques. Research J. Agriculture and Biological Sciences, 4: 278-284.

Rohlf, F. J. (2000). On the use of shape spaces to compare morphometric method. Hystrix, Italian J. Mammology (n.s.), 11: 8-24.

Saker, M. M. and H. A. Moursy (1999). Molecular characterization of Egyptian date palm. I: RAPD fingerprints. Arab J. Biotechnology, 2: 71-78.

Soliman S. S., B. A. Ali and M. M. M. Ahmed (2003). Genetic comparisons of Egyptian date palm cultivars (Phoenix dactylifera L.) by RAPD-PCR. African Journal of Biotechnology, 2: 86-86.

Trifi, M., A. Rhouma and M. Marrakchi (2000). Phylogenetic relationships in Tunisian date-palm (Phoenix dactylifera L.) germplasm collection using DNA amplification fingerprinting. Agron., 20: 665-671.

Walter, T. S. (1928). Metaxenia in the datepalm Possibly a Hormone Action by the Embryo or Endosperm. The Journal of Heredity, 19: 257-268.

Zehdi, S., M. Trifi, N. Billotte, M. Marrakchi and J. C. Pintaud (2004). Genetic diversity of Tunisian date palms (Phoenix dactylifera L.) revealed by nuclear microsatellite polymorphism. Hereditas, 141: 278-287.

Zehdi, S., M. Trifi, Ould M. Salem, A. Rhouma and M. Marrakchi (2001). Molecular Characterization of Tunisian Date-Palm germplasm using ISSR markers. Second International Conference on Date Palms, Al-Ain, United Arab Emirates, 2001 (courtesy of UAE University).

Downloads

Published

2016-01-12

Issue

Section

Articles

Most read articles by the same author(s)