PHYLOGENETIC ASSOCIATION OF ENDOPHYTIC HALOPHILES WITH PLANT GROWTH PROMOTING AND BIOCONTROL POTENTIAL FROM Avicenna marina

Authors

  • RASHA ALREEDY - Genetic engineering And Biotechnology Research Institute, Agricultural research center, Egypt - Biology department, College of science, Taibah University

Abstract

Endophytic bacteria inhabit plant tissue and offer different benefits to their host which includes growth promotion as well as biotic and a biotic stress tolerance. Plants under stress such as Avicenna marina will selectively harbor halophilic bacteria that can help them adapt to high salt concentration. The present study focuses on the isolation, molecular identification and reconstructing the phylogenetic affiliation of endophytic bacteria associated with different tissues of A. marina. Antimicrobial potential of the isolated endophytes have also been investigated. A total of twelve isolates belonging to six different genera were collected from this plant. About 53% of the isolates have plant growth promoting activity, while 20% showed strong antimicrobial activities in agar assay against the tested plant pathogens. Two isolates were found to produce significant amount of hydrogen cyanide. These results open a wide door of benefits to be gained from endophytic isolates showing advantageous potentials in enhancing economically important plant health.

References

Akinrinlola R. J., Yuen G. Y., Drijber R. A., Adesemoye A. O., (2018). Evaluation of Bacillus strains for plant growth promotion and predictability of efficacy by in vitro physiological traits. Int J. Microbiol, ID 5686874.

Al-Amoudi S., Essack M., Simões M. F., et al., (2016). Bioprospecting Red Sea Coastal Ecosystems for Culturable Microorganisms and Their Antimicrobial Potential. Mar Drugs., 14:165.

Alongi, D. M. (1988). Bacterial productivity and microbial biomass in tropical mangrove sediments. Microb Ecol., 15: 59-79.

Alstrom, S., & Burns, R. G. (1989). “Cyanide production by rhizobacteria as a possible mechanism of plant growth inhibition”. Biology and Fertility of Soils, 7: 232-238.

Altschul S. F., Gish W., Miller W. (1990). “Basic local alignment search tool”. J. Mol. Biol., 215:403-410

Andreote F. D., Jiménez D. J., Chaves D., Dias AC. F., Luvizotto DM., et al. (2012) The Microbiome of Brazilian Mangrove Sediments as Revealed by Metagenomics. PLOS ONE 7: e38600.

Bhattacharyya N. and Jha D. K., (2012). “Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture,” World Journal of Microbiology and Biotechnology, 28: 1327-1350.

Bibi, F., Ullah, I., Alvi S. A., Bakhsh, S. A., Yasir M., Al-Ghamdi A. A. K., et al. (2017). Isolation, diversity, and biotechnological potential of rhizo and endophytic bacteria associated with mangrove plants from Saudi Arabia. Genet. Mol. Res. 16:2. doi: 10.4238/gmr16029657

Borriss R., (2011). “Use of plant-associated Bacillus strains as bio-fertilizers and biocontrol agents in agriculture,” in Bacteria in Agrobiology: Plant Growth Responses, pp. 41-76, Springer, Berlin, Heidelberg, Germany.

Caulier S., Nannan C., Gillis A., Licciardi F., Bragard C., Mahillon J. (2019). Overview of the Antimicrobial Compounds Produced by Members of the Bacillus subtilis Group. Front Microbiol.; 10:302. Published 2019 Feb 26.

Compant S., Reiter B., Sessitsch A., Nowak J., Clement C., Aitbarka E. (2005). Endophytic colonization of Vitis vinifera L. by plant growth-promoting bacterium Burkholderia sp. Strain PsJN. Appl Environ Microbiol., 71:1685-1693. doi: 10.1128/AEM.71.4.1685-1693.2005.

De Souza Sebastianes, Romão F. L., Dumaresq, A. S., Lacava, P. T. et al. (2013). Species diversity of culturable endophytic fungi from Brazilian mangrove forests. Curr Genet., 59: 153-166.

Deivanai, Subramanian et al. (2014). “Culturable bacterial endophytes isolated from Mangrove tree (Rhizophora apiculata Blume) enhance seedling growth in Rice.” Journal of natural science, biology, and medicine, 5: 437-44.

Dias A.C. F., Costa F. E. C., Andreote F. D., et al. (2009). Isolation of micropropagated strawberry endophytic bacteria and assessment of their potential for plant growth promotion. World J. Microbiol Biotechnol.; 25:189-195.

Eldeen, Mohey and Abdul Wahid Mohd Effendy. (2013). “Antimicrobial agents from mangrove plants and their endophytes.”. Microbial pathogens and strategies for combating them: science, technology and education (A. Méndez-Vilas, Ed.)

El-Rahman, Azima Abd et al. (2019). “Influence of hydrogen cyanide-producing rhizobacteria in controlling the crown gall and root-knot nematode, Meloidogyne incognita.” Egyptian Journal of Biological Pest Control, 29: 1-11.

Higgins D. G., and Sharp P. M. (1988). "CLUSTAL: a package for performing multiple sequence alignment on a microcomputer". Gene. 73: 237-44

Hillis D. M., and Bull J. (1993). “An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis”. Syst. Biol., 42:182-192

Kavamura V. N., Santos S. N., Silva J. L., et al. (2013). Screening of Brazilian cacti rhizobacetria for plant growth promotion under drought. Microbiol Res., 168:183-191.

Kheirandish, Z. and Harighi B., (2015). “Evaluation of bacterial antagonists of Ralstonia solanacearum, causal agent of bacterial wilt of potato”. Biol. Control, 86:14-19.

Kumar S., Stecher G., Li M., Knyaz C., and Tamura K. (2018). “MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms”. Molecular Biology and Evolution, 35:1547-1549.

Lata, R., S. Chowdhury, S. K. Gond, and White J. F. (2018). Induction of Abiotic Stress Tolerance in Plants by Endophytic Microbes. Letters in Applied Microbiology, 66:268-76.

Liu, Hongwei et al. (2017). Inner Plant Values: Diversity, Colonization and Benefits from Endophytic Bacteria. Frontiers in microbiology , 8: 2552.

Ludwig-Müller J. (2011). Auxin conjugates: their role for plant development and in the evolution of land plants. J. Exp. Bot., 62: 1757-1773.

McSpadden-Gardener B. B., (2004). Ecology of Bacillus and Paenibacillus spp. in agricultural systems, Phytopathology, 94:1252-1258.

Mitter, B., Petric A., Shin M. W., Chain P. S. G., Hauberg-Lotte, L., Reinhold-Hurek,B., Nowak J., Sessitsch A., (2013). Comparative genome analysis of Burkholde-ria phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles basedon interaction strategies with host plants. Front. Plant Sci., 10:3389

Moran J. C., Crank E. L., Ghabban H. A., Horsburgh M. J., (2016). “Deferred Growth Inhibition Assay to Quantify the Effect of Bacteria-derived Antimicrobials on Competition”. J. Vis. Exp. (115), e54437, doi: 10.3791/54437.

Naveed M., Birgit M., Thomas G., Reichenauerb Krzysztof W., and Angela S. (2014). Increased drought stress resilience of maize through endophytic colonization by Burkholderia phytofirmans PsJN and Enterobacter sp. FD17. Environ. Experi. Bota, 97: 30-39

Pandey Pramod Kumar, Siddhartha Singh, Mayanglambam Chandrakumar Singh, Amit Kumar Singh, Pratibha Pandey, Ajai Kumar Pandey, Mahesh Pathak, Mukul Kumar, Ramesh Chandra Shakywar and Raghubir Kumar Patidar. (2017). Inside the Plants: Bacterial Endophytes and their Natural Products. Int.J.Curr.Microbiol.App. Sci., 6: 33-41

Reetha A. Karmel, et al. (2014). Hydrogen Cyanide Production Ability by bacterial antagonist and their Antibiotics Inhibition Potential on Macrophomina phaseolina (Tassi.) Goid.

Sanger F.; Coulson A. R., (1975). "A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase". J. Mol. Biol., 94: 441-8

Srivastava M. Lalit, (2002). Introduction to: hormonal regulation of developmental and physiological processes, Editor(s): Lalit M. Srivastava, Plant Growth and Development, Academic Press, Pages 283-284, ISBN 9780126605709

Stein T. (2005). Bacillus subtilis antibiotics: structures, syntheses and specific functions. Mol. Microbiol. 56: 845-857.

Tamura K. and Nei M. (1993). “Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees”. Molecular Biology and Evolution, 10:512-526.

Tan R. X., Zou W. X. (2001) Endophytes: a rich source of functional metabolites. Nat Prod Rep., 18:448-459.

Tashi-Oshnoei F., Harighi B., Abdollah-zadeh J. (2017) Isolation and identification of endophytic bacteria with plant growth promoting and biocontrol potential from oak trees. For Pathol., 47(5).

Vandenkoornhuyse, P., Quaiser A., Duhamel M., Le Van A., and Dufresne A. (2015). “The importance of the microbiome of the plant holobiont”. New Phytol., 206: 1196-1206.

Vardharajula S., Ali S. Z., Grover M., Reddy G., Bandi, V. (2011). Drought-tolerant plant growth promoting Bacillus spp.: effect on growth, osmolytes, and antioxidant status of maize under drought stress. J. Plant Inte, 6: 1-14

Vendan R. T., Yu Y. J., Lee S. H. et al. (2010). Diversity of endophytic bacteria in ginseng and their potential for plant growth promotion. J. Microbiol., 48: 559-565.

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2020-08-30

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